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LW Sciences

LW Sciences annotation workflow

PhageFlow turns phage FASTA uploads into reviewable draft reports.

Built for classroom annotation: automated enough to gather evidence quickly, transparent enough for students and instructors to inspect every call.

PhageFlow runevidence ready
Validate FASTA
Call baseline ORFs
Run evidence pass
Instructor review
ORFs67
tRNAs3
Exports6

FASTA validation

Checks sequence format, genome length, GC content, and ambiguous bases before compute starts.

Draft gene calls

Runs a six-frame ORF scan across both strands and turns candidates into a review queue.

Evidence pass

Adds tRNA detection, protein translations, Pfam domains, and BLASTp hints when databases are enabled.

Review exports

Keeps instructor notes and decisions with JSON, CSV, protein FASTA, and evidence exports.